SQU has a wide range of excellent facilities to support advanced research and post-graduate training in marine biotechnology. These include laboratories, field stations and research vessels. CEMB works closely with the College of Marine Science and Agriculture, which operates a Central Instrumentation Laboratory with advanced analytical capabilities, including high-performance liquid chromatography, gas chromatography, gas chromatography-mass spectrometer and ultra-violet/visible spectroscopy.  The Department of Marine Science and Fisheries operates a marine microbiology laboratory and has facilities for DNA analysis and marine algal culture.  Practical facilities include a marine station at Al-Hail, equipped with fish and shellfish culture facilities and a coastal research vessel ‘Al-Jamiah’, equipped for specimen collecting and oceanographic survey. Elsewhere in SQU, the College of Medicine and Health Sciences operates scanning and transmission electron microscopes, a molecular genetics laboratory and a magnetic resonance imaging unit.  The College of Science offers advanced analytical facilities through its developing Central Analytical and Applied Research Unit.
These include: 
1- X-ray diffraction, X-ray fluorescent spectrometry, inductively coupled plasma mass spectrometry, scanning and atomic force electron microscopy and flow cytometry.
2- GC-MS, Central Instrumentation Laboratory, CAMS HPLC, Central Instrumentation Laboratory, CAMS Marine Microbiology, Department of Marine Sciences and Fisheries, CAMS Recirculating Aquaculture Station, Al Hail Marine Station R.V.
3- Al-Jamiah Facilities for marine testing of coatings:
	- - Autoclave Centrifuge
 
	- - Epic-fluorescent microscope
 
	- - Gel electrophoresis apparatus with gel documentation system
 
	- - Nano-drop lite spectrophotometer
 
	- - Platefuge
 
	- - Thermal block
 
	- - Thermo-cycler
 
	- - Weighing balance
 
	- - Light meter
 
	- - Temperature-dissolved oxygen meter